Showing 1441 - 1450 of 5709 Items
Partner choice in spontaneous mitotic recombination in wild type and homologous recombination mutants of Candida albicans
Date: 2019-11-01
Creator: Alberto Bellido, Toni Ciudad, Belén Hermosa, Encarnación Andaluz, Anja, Forche, Germán Larriba
Access: Open access
- Candida albicans, the most common fungal pathogen, is a diploid with a genome that is rich in repeats and has high levels of heterozygosity. To study the role of different recombination pathways on direct-repeat recombination, we replaced either allele of the RAD52 gene (Chr6) with the URA-blaster cassette (hisG-URA3-hisG), measured rates of URA3 loss as resistance to 5-fluoroorotic acid (5FOAR) and used CHEF Southern hybridization and SNP-RFLP analysis to identify recombination mechanisms and their frequency in wildtype and recombination mutants. FOAR rates varied little across different strain backgrounds. In contrast, the type and frequency of mechanisms underlying direct repeat recombination varied greatly. For example, wildtype, rad59 and lig4 strains all displayed a bias for URA3 loss via pop-out/deletion vs. inter-homolog recombination and this bias was reduced in rad51 mutants. In addition, in rad51-derived 5FOAR strains direct repeat recombination was associated with ectopic translocation (5%), chromosome loss/truncation (14%) and inter-homolog recombination (6%). In the absence of RAD52, URA3 loss was mostly due to chromosome loss and truncation (80–90%), and the bias of retained allele frequency points to the presence of a recessive lethal allele on Chr6B. However, a few single-strand annealing (SSA)-like events were identified and these were independent of either Rad59 or Lig4. Finally, the specific sizes of Chr6 truncations suggest that the inserted URA-blaster could represent a fragile site.
Kyanite preserves prograde and retrograde metamorphic events as revealed by cathodoluminescence, geochemistry, and crystallographic orientation
Date: 2021-01-01
Creator: Emily M. Peterman, Michael J. Jercinovic, Rachel J. Beane, Cameron B. de Wet
Access: Open access
- Cathodoluminescence (CL) images of kyanite reveal several internal textures, including sector zoning, oscillatory zoning, and cross-cutting relationships among different domains. Many textures observed in kyanite correspond to discrete events, thereby connecting kyanite textures to the pressure–temperature (P–T) history of the rock. To evaluate the record of metamorphism preserved by kyanite, metapelites were selected from three different orogens that reflect P–T conditions ranging from amphibolite to ultrahigh-pressure (UHP) facies. Cross-correlation of variations in CL intensity, chemistry, and crystal orientation within kyanite indicate the following findings. First, the preservation of original growth zones in kyanite from poly-metamorphic rocks demonstrates that growth zoning in kyanite persists through metamorphic events and is not erased by diffusion or complete recrystallization. In some samples, kyanite retains evidence of its reaction history during growth. Second, measured changes in absolute crystallographic orientation do not correspond with changes in CL intensity in any of the measured samples, including kyanite twins. Third, both kink banding and undulatory extinction are present across all samples, consistent with rotation about in the (100)[001] slip system. Kyanite from (U)HP samples exhibits higher amplitude undulations than kyanite from lower-grade lithologies, suggesting that crystallographic orientation data may provide complementary insight about deformation along the P–T path. Fourth, specific CL and trace element signatures in kyanite can be correlated with discrete metamorphic histories; yet, CL intensity and colour are affected by multiple elements, not a single controlling element. In sum, multiple generations of kyanite can be identified by careful cross-correlation of CL and geochemical data, and when combined with crystal orientation data, kyanite provides a robust record of a rock's P–T evolution.
Nonlinear coherent structures in granular crystals
Date: 2017-09-06
Creator: C. Chong, Mason A. Porter, P. G. Kevrekidis, C. Daraio
Access: Open access
- The study of granular crystals, which are nonlinear metamaterials that consist of closely packed arrays of particles that interact elastically, is a vibrant area of research that combines ideas from disciplines such as materials science, nonlinear dynamics, and condensed-matter physics. Granular crystals exploit geometrical nonlinearities in their constitutive microstructure to produce properties (such as tunability and energy localization) that are not conventional to engineering materials and linear devices. In this topical review, we focus on recent experimental, computational, and theoretical results on nonlinear coherent structures in granular crystals. Such structures - which include traveling solitary waves, dispersive shock waves, and discrete breathers - have fascinating dynamics, including a diversity of both transient features and robust, long-lived patterns that emerge from broad classes of initial data. In our review, we primarily discuss phenomena in one-dimensional crystals, as most research to date has focused on such scenarios, but we also present some extensions to two-dimensional settings. Throughout the review, we highlight open problems and discuss a variety of potential engineering applications that arise from the rich dynamic response of granular crystals.
Production and decay of D1 (2420)0 and D2* (2460)0
Date: 1994-06-30
Creator: P. Avery, A. Freyberger, J. Rodriguez, R. Stephens, S., Yang, J. Yelton, D. Cinabro, S. Henderson, T. Liu, M. Saulnier, R. Wilson, H. Yamamoto, T. Bergfeld, B. I. Eisenstein, G. Gollin, B. Ong, M. Palmer, M. Selen, J. J. Thaler, K. W. Edwards, M. Ogg, B. Spaan, A. Bellerive, D. I. Britton, E. R.F. Hyatt, D. B. MacFarlane, P. M. Patel, A. J. Sadoff, R. Ammar, S. Ball, P. Baringer
Access: Open access
- We have investigated D+ π- and D*+ π- final states and observed the two established L = 1 charmed mesons, the D1 (2420)0 with mass 2421-2-2+1+2 MeV/c2 and width 20-5-3+6+3 MeV/c2 and the D2* (2460)0 with mass 2465 ± 3 ± 3 MeV/c2 and width 28-7-6+8+6 MeV/c2. Properties of these final states, including their decay angular distributions and spin-parity assignments, have been studied. We identify these two mesons as the jlight = 3 2 doublet predicted by HQET. We also obtain constraints on Γs/ (Γs + ΓD) as a function of the cosine of the relative phase of the two amplitudes in the D1 (2420)0 decay. © 1994.
Two-photon production of charged pion and kaon pairs
Date: 1994-01-01
Creator: J. Dominick, M. Lambrecht, S. Sanghera, V. Shelkov, T., Skwarnicki, R. Stroynowski, I. Volobouev, G. Wei, P. Zadorozhny, M. Artuso, M. Goldberg, D. He, N. Horwitz, R. Kennett, R. Mountain, G. C. Moneti, F. Muheim, Y. Mukhin, S. Playfer, Y. Rozen, S. Stone, M. Thulasidas, G. Vasseur, G. Zhu, J. Bartelt, S. E. Csorna, Z. Egyed, V. Jain, K. Kinoshita, K. W. Edwards, M. Ogg
Access: Open access
- A measurement of the cross section for the combined two-photon production of charged pion and kaon pairs is performed using 1.2 fb-1 of data collected by the CLEO II detector at the Cornell Electron Storage Ring. The cross section is measured at invariant masses of the two-photon system between 1.5 and 5.0 GeV/c2, and at scattering angles more than 53° away from the γγ collision axis in the γγ center-of-mass frame. The large background of leptonic events is suppressed by utilizing the CsI calorimeter in conjunction with the muon chamber system. The reported cross section is compared with leading order QCD models as well as previous experiments. Although the functional dependence of the measured cross section disagrees with leading order QCD at small values of the two-photon invaraint mass, the data show qualitatively a transition to perturbative behavior at an invariant mass of approximately 2.5 GeV/c2. © 1994 The American Physical Society.
Measurement of the branching fraction scrB(τ-→h- →π0ντ)
Date: 1994-01-01
Creator: M. Artuso, M. Goldberg, D. He, N. Horwitz, R., Kennett, R. Mountain, G. C. Moneti, F. Muheim, Y. Mukhin, S. Playfer, Y. Rozen, S. Stone, M. Thulasidas, G. Vasseur, X. Xing, G. Zhu, J. Bartelt, S. E. Csorna, Z. Egyed, V. Jain, K. Kinoshita, B. Barish, M. Chadha, S. Chan, D. F. Cowen, G. Eigen, J. S. Miller, C. O'Grady, J. Urheim, A. J. Weinstein, D. Acosta
Access: Open access
- Using data from the CLEO II detector at the Cornell Electron Storage Ring, we measure scrB(τ-→h-π0ντ) where h- refers to either π- or K-. We use three different methods to measure this branching fraction. The combined result is scrB(τ-→h-π0ντ)=0.2587±0. 0012±0.0042, in good agreement with standard model predictions. © 1994 The American Physical Society.
Peripheral modulation of cardiac contractions in the American lobster, Homarus americanus, by the peptide myosuppressin is mediated by effects on the cardiac muscle itself
Date: 2023-01-01
Creator: Isabel Stella Petropoulos
Access: Open access
- A substantial factor for behavioral flexibility is modulation — largely via neuropeptides — which occurs at multiple sites including neurons, muscles, and the neuromuscular junction (NMJ). Complex modulation distributed across multiple sites provides an interesting question: does modulation at multiple locations lead to greater dynamics than one receptor site alone? The cardiac neuromuscular system of the American lobster (Homarus americanus), driven by a central pattern generator called the cardiac ganglion (CG), is a model system for peptide modulation. The peptide myosuppressin (pQDLDHVFLRFamide) has been shown in the whole heart to decrease contraction frequency, largely due to its effects on the CG, as well as increase contraction amplitude by acting on periphery of the neuromuscular system, either at the cardiac muscle, the NMJ, or both. This set of experiments addresses the location(s) at which myosuppressin exerts its effects at the periphery. To elucidate myosuppressin’s effects on the cardiac muscle, the CG was removed, and muscle contractions were stimulated with L-glutamate while superfusing myosuppressin. Myosuppressin increased glutamate-evoked contraction amplitude in the isolated muscle, suggesting that myosuppressin exerts its peripheral effects directly on the cardiac muscle. To examine effects on the NMJ, excitatory junction potentials were evoked by stimulating of the motor nerve and intracellularly recording a single muscle fiber both in control saline and in the presence of myosuppressin. Myosuppressin did not modulate the amplitude of EJPs suggesting myosuppressin acts at the muscle and not at the NMJ, to cause an increase in contraction amplitude.