Showing 5011 - 5020 of 5701 Items
Partitioning of the global fossil CO2 sink using a 19-year trend in atmospheric O2
Date: 1999-07-01
Creator: R. L. Langenfelds, R. J. Francey, L. P. Steele, M. Battle, R. F., Keeling, W. F. Budd
Access: Open access
- O2/N2 is measured in the Cape Grim Air Archive (CGAA), a suite of tanks filled with background air at Cape Grim, Tasmania (40.7°S, 144.8°E) between April 1978 and January 1997. Derived trends are compared with published O2/N2 records and assessed against limits on interannual variability of net terrestrial exchanges imposed by trends of δ13C in CO2. Two old samples from 1978 and 1987 and eight from 1996/97 survive critical selection criteria and give a mean 19-year trend in δ(O2/N2) of -16.7 ± 0.5 per meg yr-1, implying net storage of +2.3 ± 0.7 GtC (1015 g carbon) yr-1 of fossil fuel CO2 in the oceans and +0.2 ± 0.9 GtC yr-1 in the terrestrial biosphere. The uptake terms are consistent for both O2/N2 and δ13C tracers if the mean 13C isotopic disequilibrium flux, combining terrestrial and oceanic contributions, is 93 ± 15 GtC ‰ yr-1. Copyright 1999 by the American Geophysical Union.
The tyrosine kinase Abl and its substrate enabled collaborate with the receptor phosphatase Dlar to control motor axon guidance
Date: 1999-01-01
Creator: Zachary Wills, Jack Bateman, Christopher A. Korey, Allen Comer, David, Van Vactor
Access: Open access
- Genetic analysis of growth cone guidance choice points in Drosophila identified neuronal receptor protein tyrosine phosphatases (RPTPs) as key determinants of axon pathfinding behavior. We now demonstrate that the Drosophila Abl tyrosine kinase functions in the intersegmental nerve b (ISNb) motor choice point pathway as an antagonist of the RPTP Dlar. The function of Abl in this pathway is dependent on an intact catalytic domain. We also show that the Abl phosphoprotein substrate Enabled (Ena) is required for choice point navigation. Both Abl and Ena proteins associate with the Dlar cytoplasmic domain and serve as substrates for Dlar in vitro, suggesting that they play a direct role in the Dlar pathway. These data suggest that Dlar, Abl, and Ena define a phosphorylation state-dependent switch that controls growth cone behavior by transmitting signals at the cell surface to the actin cytoskeleton.
The twin spot generator for differential Drosophila lineage analysis
Date: 2009-07-28
Creator: Ruth Griffin, Anne Sustar, Marianne Bonvin, Richard Binari, Alberto, del Valle Rodriguez, Amber M. Hohl, Jack R. Bateman, Christians Villalta, Elleard Heffern, Didier Grunwald, Chris Bakal, Claude Desplan, Gerold Schubiger, C. Ting Wu, Norbert Perrimon
Access: Open access
- In Drosophila melanogaster, widely used mitotic recombination-based strategies generate mosaic flies with positive readout for only one daughter cell after division. To differentially label both daughter cells, we developed the twin spot generator (TSG) technique, which through mitotic recombination generates green and red twin spots that are detectable after the first cell division as single cells. We propose wide applications of TSG to lineage and genetic mosaic studies.
Living Upstream: Kennebec River Influence on Nutrient Regimes and Phytoplankton Communities in Harpswell Sound
Date: 2020-01-01
Creator: Siena Brook Ballance
Access: Open access
- Phytoplankton underpin marine trophic systems and biogeochemical cycles. Estuarine and coastal phytoplankton account for 40-50% of global ocean primary productivity and carbon flux making it critical to identify sources of variability. This project focuses on the Kennebec River and Harpswell Sound, a downstream, but hydrologically connected coastal estuary, as a case study of temperate river influence on estuarine nutrient regimes and phytoplankton communities. Phytoplankton pigments and nutrients were analyzed from water samples collected monthly at 8 main-stem rivers stations (2011-2013) and weekly in Harpswell Sound (2008-2017) during ice-free months. Spatial bedrock and land use impacts on river nutrients were investigated at sub-watershed scales using GIS. Spatial analysis reveals a 10-fold increase in measured phytoplankton biomass across the Kennebec River’s saltwater boundary, which demonstrates ocean-driven phytoplankton variability in the lower river. The biomass pattern is accompanied by a transition in phytoplankton community structure with respect to which groups co-occur (diatoms, chlorophytes, and cryptophytes) and which are unique (dinoflagellates in Harpswell). Upstream, the timing of each community depends on land-use proximity and seasonal discharge. In Harpswell Sound, the nutrient regime and phytoplankton community structure vary systematically: first diatoms strip silicate, then dinoflagellates utilize nitrate, followed by chlorophytes and cryptophytes that utilize available phosphate. These findings reveal, for the first time, patterns in phytoplankton communities and nutrient dynamics across the fresh to salt water interface. Ultimately the Kennebec River phytoplankton communities and nutrient regimes are distinct, and the river is only a source of silicate to Harpswell Sound.
Bowdoin College Catalogue (1942 Summer Session)
Date: 1942-01-01
Access: Open access
- Bowdoin College Bulletin no. 262
The Role of the Nitric Oxide Negative Feedback Loop in the Stability of the Lobster Cardiac Ganglion Homarus americanus Access to this record is restricted to members of the Bowdoin community. Log in here to view.
Date: 2020-01-01
Creator: Marie Marjorie Bergsund
Access: Access restricted to the Bowdoin Community
Quantitative estimation of localization errors of 3 d transition metal pseudopotentials in diffusion Monte Carlo
Date: 2017-07-14
Creator: Allison L. Dzubak, Jaron T. Krogel, Fernando A. Reboredo
Access: Open access
- The necessarily approximate evaluation of non-local pseudopotentials in diffusion Monte Carlo (DMC) introduces localization errors. We estimate these errors for two families of non-local pseudopotentials for the first-row transition metal atoms Sc-Zn using an extrapolation scheme and multideterminant wavefunctions. Sensitivities of the error in the DMC energies to the Jastrow factor are used to estimate the quality of two sets of pseudopotentials with respect to locality error reduction. The locality approximation and T-moves scheme are also compared for accuracy of total energies. After estimating the removal of the locality and T-moves errors, we present the range of fixed-node energies between a single determinant description and a full valence multideterminant complete active space expansion. The results for these pseudopotentials agree with previous findings that the locality approximation is less sensitive to changes in the Jastrow than T-moves yielding more accurate total energies, however not necessarily more accurate energy differences. For both the locality approximation and T-moves, we find decreasing Jastrow sensitivity moving left to right across the series Sc-Zn. The recently generated pseudopotentials of Krogel et al. [Phys. Rev. B 93, 075143 (2016)] reduce the magnitude of the locality error compared with the pseudopotentials of Burkatzki et al. [J. Chem. Phys. 129, 164115 (2008)] by an average estimated 40% using the locality approximation. The estimated locality error is equivalent for both sets of pseudopotentials when T-moves is used. For the Sc-Zn atomic series with these pseudopotentials, and using up to three-body Jastrow factors, our results suggest that the fixed-node error is dominant over the locality error when a single determinant is used.
Characterizing the influence of Atlantic water intrusion on water mass formation and phytoplankton distribution in Kongsfjorden, Svalbard
Date: 2019-12-01
Creator: Courtney M. Payne, Collin S. Roesler
Access: Open access
- Warm water intrusion into Arctic fjords is increasingly affecting polar ecosystems. This study investigated how Atlantic water intrusion and tidewater glacial melting impacted water mass formation and phytoplankton distribution in Kongsfjorden, Svalbard. Field data were collected over a 2-week period during the height of the melt season in August 2014 and were contextualized within an 18-year regional MODIS satellite record. Since 1998, intruding waters have warmed by 4–5.5 °C, which has prevented sea ice formation and changed the characteristics of fjord bottom waters. Modeled light fields suggest that suspended sediment in this glacial meltwater has reduced the euphotic zone close to the ice face, contributing to lower phytoplankton concentrations in both persistent and intermittently sediment-laden meltwater plumes. However, measurements collected close to terrestrially terminating glaciers indicate that turbidity is significantly lower in the meltwater plumes, resulting in deep euphotic zones and high phytoplankton concentrations. The results of this study support a three-part conceptual model of the effects of warm-water intrusion on water mass formation and primary production within 10 km of tidewater glaciers. Initially, warm water intrusion reduces sea ice coverage, which increases the euphotic depth and increases phytoplankton biomass. Warm water intrusions may also result in increased melting of tidewater glaciers, enhanced sediment release, reduction in euphotic depth and reduction in phytoplankton biomass. Ultimately, as tidewater glaciers retreat and become terrestrially terminating, the sediment load decreases, the euphotic zone again increases, and phytoplankton biomass increases.