Showing 4101 - 4150 of 5831 Items
Discrimination of phytoplankton functional groups using an ocean reflectance inversion model
Date: 2014-08-01
Creator: P. Jeremy Werdell, Collin S. Roesler, Joaquim I. Goes
Access: Open access
- Ocean reflectance inversion models (ORMs) provide a mechanism for inverting the color of the water observed by a satellite into marine inherent optical properties (IOPs), which can then be used to study phytoplankton community structure. Most ORMs effectively separate the total signal of the collective phytoplankton community from other water column constituents; however, few have been shown to effectively identify individual contributions by multiple phytoplankton groups over a large range of environmental conditions. We evaluated the ability of an ORM to discriminate between Noctiluca miliaris and diatoms under conditions typical of the northern Arabian Sea. We: (1) synthesized profiles of IOPs that represent bio-optical conditions for the Arabian Sea; (2) generated remote-sensing reflectances from these profiles using Hydrolight; and (3) applied the ORM to the synthesized reflectances to estimate the relative concentrations of diatoms and N. miliaris. By comparing the estimates from the inversion model with those from synthesized vertical profiles, we identified those conditions under which the ORM performs both well and poorly. Even under perfectly controlled conditions, the absolute accuracy of ORM retrievals degraded when further deconstructing the derived total phytoplankton signal into subcomponents. Although the absolute magnitudes maintained biases, the ORM successfully detected whether or not Noctiluca miliaris appeared in the simulated water column. This quantitatively calls for caution when interpreting the absolute magnitudes of the retrievals, but qualitatively suggests that the ORM provides a robust mechanism for identifying the presence or absence of species.
Donald Lent: Paintings, Drawings, Etchings
Date: 1967-01-01
Access: Open access
- Catalog of an exhibition held at the Bowdoin College Museum of Art. "Design and composition by the Anthoensen Press."
Political advertising and persuasion in the 2004 and 2008 presidential elections
Date: 2010-03-01
Creator: Michael M. Franz, Travis N. Ridout
Access: Open access
- The 2008 presidential election was historic in many respects. The campaign included the first African American major-party candidate, and neither candidate was an incumbent president or vice president. In addition, one candidate took public funding and the other candidate did not. This latter disparity resulted in an imbalance of resources across the two campaigns, especially in the purchase of political advertising. But did that imbalance matter for who won? Did advertising move voters, and if so, by how much? This article examines patterns of presidential ad buys in 2008 and compares them with presidential ad buys in 2004. It also examines the impact of advertising on county-level vote returns in both years. The results demonstrate some important differences in advertising patterns across years, especially in terms of ad sponsorship and market-level advertising advantages. We also find significant and strong advertising persuasion effects in 2008. © The Author(s) 2010.
Commercial plant production and consumption still follow the latitudinal gradient in species diversity despite economic globalization
Date: 2016-10-01
Creator: Erik J. Nelson, Matthew R. Helmus, Jeannine Cavender-Bares, Stephen Polasky, Jesse R., Lasky, Amy E. Zanne, William D. Pearse, Nathan J.B. Kraft, Daniela A. Miteva
Access: Open access
- Increasing trade between countries and gains in income have given consumers around the world access to a richer and more diverse set of commercial plant products (i.e., foods and fibers produced by farmers). According to the economic theory of comparative advantage, countries open to trade will be able to consume more-in termsof volume and diversity-if they concentrate production on commodities that they can most cost-effectively produce, while importing goods that are expensive to produce, relative to other countries. Here, we performa global analysis of traded commercial plant products and find little evidence that increasing globalization has incentivized agricultural specialization. Instead, a country's plant production and consumption patterns are still largely determined by local evolutionary legacies of plant diversification. Because tropical countries harbor a greater diversity of lineages across the tree of life than temperate countries, tropical countries produce and consume a greater diversity of plant products than do temperate countries. In contrast, the richer and more economically advanced temperate countries have the capacity to produce and consume more plant species than the generally poorer tropical countries, yet this collection of plant species is drawn from fewer branches on the tree of life. Why have countries not increasingly specialized in plant production despite the theoretical financial incentive to do so? Potential explanations include the persistence of domestic agricultural subsidies that distort production decisions, cultural preferences for diverse local food production, and that diverse food production protects rural households in developing countries from food price shocks. Less specialized production patterns will make crop systems more resilient to zonal climatic and social perturbations,but this may come at the expense of global crop production efficiency, an important step in making the transition to a hotter and more crowded world.
Carbon credits compete poorly with agricultural commodities in an optimized model of land use in Northern California
Date: 2016-11-01
Creator: Erik Nelson, Virginia Matzek
Access: Open access
- Nascent US carbon markets reward farmers for reforesting agricultural land, with consequent ecological co-benefits. We use a dynamic optimization model to determine the likelihood of an orchard farmer in northern California converting to forest under 90 plausible future scenarios. We find reforestation to be a highly unlikely outcome, occurring only 4.0% of the time under current economic, biophysical, and policy conditions, and only 18.5% of the time under a set of assumptions that make carbon offset production more economically viable. Conversion to "carbon farming" was more sensitive to changes in orchard production costs and yields than to carbon offset policy changes. In the absence of other changes, the price of a carbon offset would have to increase nearly a hundredfold to make reforestation compete economically with orchard agriculture. Our results partly explain low participation in the reforestation sector of US carbon markets. We conclude that farmers will not be interested in forest conversion unless their land has limited agricultural potential or they are motivated by social, rather than economic, rewards.
Medals and Plaquettes from the Molinari Collection at Bowdoin College
Date: 1976-01-01
Creator: Andrea S. Norris, Ingrid S. Weber
Access: Open access
- Catalogue of the exhibition of medals. With an introduction to the medals catalogue by Graham Pollard. "Typographic composition and letterpress printing by the Anthoensen Press, Portland, Maine"--T.p. verso
SR-Like RNA-binding protein Slr1 affects Candida albicans filamentation and virulence
Date: 2013-04-01
Creator: Chaiyaboot Ariyachet, Norma V. Solis, Yaoping Liu, Nemani V. Prasadarao, Scott G., Filler, Anne E. McBride
Access: Open access
- Candida albicans causes both mucosal and disseminated infections, and its capacity to grow as both yeast and hyphae is a key virulence factor. Hyphal formation is a type of polarized growth, and members of the SR (serine-arginine) family of RNA-binding proteins influence polarized growth of both Saccharomyces cerevisiae and Aspergillus nidulans. Therefore, we investigated whether SR-like proteins affect filamentous growth and virulence of C. albicans. BLAST searches with S. cerevisiae SR-like protein Npl3 (ScNpl3) identified two C. albicans proteins: CaNpl3, an apparent ScNpl3 ortholog, and Slr1, another SR-like RNAbinding protein with no close S. cerevisiae ortholog. Whereas ScNpl3 was critical for growth, deletion of NPL3 in C. albicans resulted in few phenotypic changes. In contrast, the slr1δ/δ mutant had a reduced growth rate in vitro, decreased filamentation, and impaired capacity to damage epithelial and endothelial cells in vitro. Mice infected intravenously with the slr1δ/δ mutant strain had significantly prolonged survival compared to that of mice infected with the wild-type or slr1δ/δ mutant complemented with SLR1 (slr1δ/δ+SLR1) strain, without a concomitant decrease in kidney fungal burden. Histopathology, however, revealed differential localization of slr1δ/δ hyphal and yeast morphologies within the kidney. Mice infected with slr1δ/δ cells also had an increased brain fungal burden, which correlated with increased invasion of brain, but not umbilical vein, endothelial cells in vitro. The enhanced brain endothelial cell invasion was likely due to the increased surface exposure of the Als3 adhesin on slr1δ/δ cells. Our results indicate that Slr1 is an SR-like protein that influences C. albicans growth, filamentation, host cell interactions, and virulence. © 2013, American Society for Microbiology.
Ancient Art of Middle America
Date: 1969-01-01
Creator: Roger Howell, Jr.
Access: Open access
- Catalog of an exhibition. Essay by Roger Howell; note by Richard V. West.
Homolog Pairing at the Push of a Button
Date: 2019-11-04
Creator: Jack R. Bateman, Judith A. Kassis
Access: Open access
- Homologous chromosomes pair in somatic cells in Drosophila, but how this occurs is poorly understood. In this issue of Developmental Cell, Viets et al. (2019) show that proteins and chromatin structure mediate pairing and argue against a DNA sequence-based mechanism.
The interest group response to campaign finance reform
Date: 2008-04-03
Creator: Michael M. Franz
Access: Open access
- Has the most recent campaign finance reform failed relative to interest groups? More broadly, what's next in the realm of interest group electioneering? This paper explores the role of interest groups in two areas: as contributors to candidates and parties and as candidate and issue advocates. Overall, the numbers reported here show that direct interest group influence with candidates and parties likely declined in the wake of reform. On the other hand, recent uncertainty in the regulatory environment should foster the expansion of interest group advocacy efforts (and has already done so in this year's presidential primary elections). On this score, the attempts of reformers to reduce interest group electioneering have likely failed. Instead of concluding that such a development is bad for American elections, however, this paper argues that such discontent is misplaced. Copyright ©2008 The Berkeley Electronic Press. All rights reserved.
Reflections questionnaire response by Anonymous on March 24, 2021
Date: 2021-01-01
Creator: Anonymous
Access: Open access
- This is a response to the Documenting Bowdoin & COVID-19 Reflections Questionnaire. The questionnaire was created in March 2021 by staff of Bowdoin's George J. Mitchell Department of Special Collections & Archives. Author is class of 2024.
Rachel Carson and the rhetoric of revolution
Date: 2019-07-01
Creator: David K. Hecht
Access: Open access
- Rachel Carson's Silent Spring is justly remembered as a landmark in the history of modern environmentalism. It is, however, a more complicated text than cultural memory tends to acknowledge. Blending conservative and traditional elements with more progressive and pioneering ones, Silent Spring is marked by a complexity that extends to its reception and legacy. This article argues that-in a seeming paradox-it was the more conservative elements of Silent Spring that allowed it to be considered a revolutionary book. Carson carefully constructed her argument in ways that facilitated its initial acceptance. But those same decisions made it easier for supporters to de-emphasize its more radical implications, even as they granted it revolutionary status.
The Importance of What We Care About: A Solidarity Approach to Resource Allocation
Date: 2020-01-01
Creator: Kristi A. Olson
Access: Open access
- At some point in your life, you will need to allocate resources among individuals, but how should you do so? One prominent suggestion is the envy test: the envy test is satisfied when and only when no one prefers someone else’s bundle. In Part I, I explain and then reject Tom Parr’s recent attempt to justify the envy test. Yet, like Parr, I believe the envy test captures something important. Thus, in Part II, I distinguish two approaches to resource allocation. Parr’s defense of the envy test assumes what I will call an individualist approach: what matters are each individual’s preferences. In lieu of the individualist approach, I endorse the solidarity approach: what matters are everyone’s preferences. After explaining the distinction, I show that the envy test—or at least something like it—can be defended using the solidarity approach even if it cannot be defended using the individualist approach.
Formation of rarefaction waves in origami-based metamaterials
Date: 2016-04-15
Creator: H. Yasuda, C. Chong, E. G. Charalampidis, P. G. Kevrekidis, J., Yang
Access: Open access
- We investigate the nonlinear wave dynamics of origami-based metamaterials composed of Tachi-Miura polyhedron (TMP) unit cells. These cells exhibit strain softening behavior under compression, which can be tuned by modifying their geometrical configurations or initial folded conditions. We assemble these TMP cells into a cluster of origami-based metamaterials, and we theoretically model and numerically analyze their wave transmission mechanism under external impact. Numerical simulations show that origami-based metamaterials can provide a prototypical platform for the formation of nonlinear coherent structures in the form of rarefaction waves, which feature a tensile wavefront upon the application of compression to the system. We also demonstrate the existence of numerically exact traveling rarefaction waves in an effective lumped-mass model. Origami-based metamaterials can be highly useful for mitigating shock waves, potentially enabling a wide variety of engineering applications.
Captured segment exchange: A strategy for custom engineering large genomic regions in Drosophila melanogaster
Date: 2013-04-24
Creator: Jack R. Bateman, Michael F. Palopoli, Sarah T. Dale, Jennifer E. Stauffer, Anita L., Shah, Justine E. Johnson, Conor W. Walsh, Hanna Flaten, Christine M. Parsons
Access: Open access
- Site-specific recombinases (SSRs) are valuable tools for manipulating genomes. In Drosophila, thousands of transgenic insertions carrying SSR recognition sites have been distributed throughout the genome by several large-scale projects. Here we describe a method with the potential to use these insertions to make custom alterations to the Drosophila genome in vivo. Specifically, by employing recombineering techniques and a dual recombinase-mediated cassette exchange strategy based on the phiC31 integrase and FLP recombinase, we show that a large genomic segment that lies between two SSR recognition-site insertions can be "captured" as a target cassette and exchanged for a sequence that was engineered in bacterial cells. We demonstrate this approach by targeting a 50-kb segment spanning the tsh gene, replacing the existing segment with corresponding recombineered sequences through simple and efficient manipulations. Given the high density of SSR recognition-site insertions in Drosophila, our method affords a straightforward and highly efficient approach to explore gene function in situ for a substantial portion of the Drosophila genome. © 2013 by the Genetics Society of America.
Anthropogenic Impacts on Atmospheric Carbonyl Sulfide Since the 19th Century Inferred From Polar Firn Air and Ice Core Measurements
Date: 2020-08-27
Creator: M. Aydin, G. L. Britten, S. A. Montzka, C. Buizert, F., Primeau, V. Petrenko, M. B. Battle, M. R. Nicewonger, J. Patterson, B. Hmiel, E. S. Saltzman
Access: Open access
- Carbonyl sulfide (COS) was measured in firn air collected during seven different field campaigns carried out at four different sites in Greenland and Antarctica between 2001 and 2015. A Bayesian probabilistic statistical model is used to conduct multisite inversions and to reconstruct separate atmospheric histories for Greenland and Antarctica. The firn air inversions cover most of the 20th century over Greenland and extend back to the 19th century over Antarctica. The derived atmospheric histories are consistent with independent surface air time series data from the corresponding sites and the Antarctic ice core COS records during periods of overlap. Atmospheric COS levels began to increase over preindustrial levels starting in the 19th century, and the increase continued for much of the 20th century. Atmospheric COS peaked at higher than present-day levels around 1975 CE over Greenland and around 1987 CE over Antarctica. An atmosphere/surface ocean box model is used to investigate the possible causes of observed variability. The results suggest that changes in the magnitude and location of anthropogenic sources have had a strong influence on the observed atmospheric COS variability.
Developmental genetic mechanisms of evolutionary tooth loss in cypriniform fishes
Date: 2006-08-01
Creator: David W. Stock, William R. Jackman, Josh Trapani
Access: Open access
- The fossil record indicates that cypriniform fishes, a group including the zebrafish, lost oral teeth over 50 million years ago. Despite subsequent diversification of feeding modes, no cypriniform has regained oral teeth, suggesting the zebrafish as a model for studying the developmental genetic basis of evolutionary constraint. To investigate the mechanism of cypriniform tooth loss, we compared the oral expression of seven genes whose mammalian orthologs are involved in tooth initiation in the zebrafish and the Mexican tetra, Astyanax mexicanus, a related species retaining oral teeth. The most significant difference we found was an absence in zebrafish oral epithelium of expression of dlx2a and dlx2b, transcription factors that are expressed in early Astyanax odontogenic epithelium. Analysis of orthologous genes in the Japanese medaka (Oryzias latipes) and a catfish (Synodontis multipunctatus) suggests that expression was lost in cypriniforms, rather than gained in Astyanax. Treatment of Astyanaxwith an inhibitor of Fibroblast growth factor (Fgf) signaling produced a partial phenocopy of the zebrafish oral region, in that oral teeth, and expression of d1x2a and d1x2b, were lost, whereas shh and pitx2, genes whose expression is present in zebrafish oral epithelium, were unaffected. We hypothesize that a loss of Fgf signaling to oral epithelium was associated with cypriniform tooth loss.
Efficient and rapid identification of Candida albicans allelic status using SNP-RFLP
Date: 2009-11-01
Creator: Anja Forche, Musetta Steinbach, Judith Berman
Access: Open access
- Candida albicans is the most prevalent opportunistic fungal pathogen in the clinical setting, causing a wide spectrum of diseases ranging from superficial mucosal lesions to life-threatening deep-tissue infections. Recent studies provide strong evidence that C. albicans possesses an arsenal of genetic mechanisms promoting genome plasticity and that it uses these mechanisms under conditions of nutritional or antifungal drug stress. Two microarray-based methods, single nucleotide polymorphism (SNP) and comparative genome hybridization arrays, have been developed to study genome changes in C. albicans. However, array technologies can be relatively expensive and are not available to every laboratory. In addition, they often generate more data than needed to analyze specific genomic loci or regions. Here, we have developed a set of SNP-restriction fragment length polymorphism (RFLP) (or PCR-RFLP) markers, two per chromosome arm, for C. albicans. These markers can be used to rapidly and accurately detect large-scale changes in the C. albicans genome including loss of heterozygosity (LOH) at single loci, across chromosome arms or across whole chromosomes. Furthermore, skewed SNP-RFLP allelic ratios are indicative of trisomy at heterozygous loci. While less comprehensive than array-based approaches, we propose SNP-RFLP as an inexpensive, rapid, and reliable method to screen strains of interest for possible genome changes. © 2009 Federation of European Microbiological Societies.
Cell Adhesion in Arabidopsis thaliana Access to this record is restricted to members of the Bowdoin community. Log in here to view.
Date: 2019-05-01
Creator: Natasha Ann Belsky
Access: Access restricted to the Bowdoin Community
Transgenic analysis of Dlx regulation in fish tooth development reveals evolutionary retention of enhancer function despite organ loss
Date: 2006-12-19
Creator: William R. Jackman, David W. Stock
Access: Open access
- It has been considered a "law" that a lost structure cannot reappear in evolution. The common explanation, that genes required for the development of the lost structure degrade by mutation, remains largely theoretical, however. Additionally, the extent to which this mechanism applies to systems of repeated parts, where individual modules are likely to exhibit few unique aspects of genetic control, is unclear. We investigated reversibility of evolution in one such system, the vertebrate dentition, using as a model loss of oral teeth in cypriniform fishes, which include the zebra fish. This evolutionary event, which occurred >50 million years ago, has not been reversed despite subsequent diversification of feeding modes and retention of pharyngeal teeth. We asked whether the cis-regulatory region of a gene whose expression loss parallels cypriniform tooth loss, Dlx2b, retains the capacity for expression in oral teeth. We first created a zebrafish reporter transgenic line that recapitulates endogenous dlx2b expression. We then showed that this zebrafish construct drives reporter expression in oral teeth of the related characiform Astyanax mexicanus. This result, along with our finding that Dlx genes are required for normal tooth development, suggests that changes in trans-acting regulators of these genes were responsible for loss of cypriniform oral teeth. Preservation of oral enhancer function unused for >50 million years could be the result of pleiotropic function in the pharyngeal dentition. If enhancers of other genes in the tooth developmental pathway are similarly preserved, teeth lost from specific regions may be relatively easy to reacquire in evolution. © 2006 by The National Academy of Sciences of the USA.
Effects of Alkalinity and Ocean Acidification on Clam Shell Development in Phippsburg, ME
Date: 2014-08-01
Creator: Bailey Moritz
Access: Open access
- With increased CO2 in the atmosphere from the burning of fossil fuels, more is absorbed into the surface ocean, causing a reaction that leads to lower pH. This process is known as ocean acidification, which has raised global concern. Over the past decade, the clam flat near Head Beach in Phippsburg has been reduced to approximately a sixth of its former productive area. The town of Phippsburg allots money every spring to seed the clam flat with juvenile soft-shell clams (Mya arenaria) in order to support the local clamming economy, but the clams are no longer growing in much of the mud flat. A possible explanation for this loss is acidification. In order to understand if ocean acidification is the cause, I collected water samples from the mud to test for alkalinity along a transect of 5 sites spanning productive and non-productive areas of the flat. Alkalinity is a measurement of the waters ability to buffer pH changes. Lower alkalinity could mean that clams would have more difficulty forming their calcium carbonate shells due to dissolution in low pH waters. Combined with the pH measurements gathered by my peer, Lloyd Anderson ‘16, we were able to calculate aragonite saturation state. Water with a saturation state below 1 is capable of dissolving calcium carbonate (aragonite) shells. A large portion of this research project was figuring out the best methodology to use for collecting data on the clam flat. The tested water needs to represent that which the clams are actually using while they are embedded in the mud. Additionally, juvenile clams only live in the upper centimeter or so of sediment. We followed methodologies used in past studies in Maine (Green et al 2013). Three pore water samples from each site were extracted and brought back to the lab to be filtered on 7 separate days throughout July. We began sampling 2 hours prior to low tide. I determined alkalinity using an automated titration system. Average alkalinity ranged from 2200-2500 μeq/kg. The results indicated that there was not a significant difference or pattern in alkalinity or saturation state between productive and unproductive areas of the clam flat (Fig. 1). Error bars in the figure represent variability at each site over the entire study period, while analytical reproducibility was ± 9.04 μeq/L. Large changes were observed merely from one day to another. Coastal ecosystems are complex and variations such as time of day, temperature, or productivity may have influences on the porewater characteristics (Duarte 2013). While ocean acidification does not appear to be the primary driving force behind the clams’ decline at this location, the saturation state was consistently quite low ( Final Report of research funded by the Rusack Coastal Studies Fellowship.
Salton Collection : Renaissance & Baroque Medals & Plaquettes (1969 Revision)
Date: 1969-01-01
Access: Open access
- "The present collection ... belongs to Mr. and Mrs. Mark Salton of New York." "One thousand five hundred copies of this catalogue have been printed ... Composition by the Anthosensen Press, Portland, Maine. Photography by John McKee. Design by Leonard Baskin. October MCMLXV"--Colophon This is a revised edition of the 1965 original publication.
Investigating the Effects of Climatic Change and Fire Dynamics on Peatland Carbon Accumulation in Coastal Labrador, Canada
Date: 2014-08-01
Creator: Anna Hall
Access: Open access
- High-latitude peatlands store a large stock of carbon in accumulated belowground biomass, estimated at 500 ± 100 Gt C (Yu 2012). For comparison, the atmospheric C pool is estimated at about 775 Gt (IPCC 2007) making the peatland carbon pool a potentially significant player in the global carbon cycle. Peatland carbon storage is controlled by a balance between plant productivity and decomposition, with plant matter produced during the summer months accumulating from year to year rather than fully decomposing. Peatlands are sensitive to changes in climatic regime and have the potential to shift from a net sink of atmospheric C to a net source of C with future disturbance by climate warming (Yu 2012).There are two major predictions as to how climate change could affect peatland C accumulation. Warmer temperatures could cause faster decomposition of plant biomass and lead to C release to the atmosphere and a positive feedback effect on climate change (Schuur et al. 2008). If this is the case, current warming trends suggest that peatlands could release up to 100 Gt C to the atmosphere by the year 2100 (Davidson and Janssens 2006). Alternatively, warmer summer temperatures and a longer growing season could lead to faster peat production and therefore CO2 drawdown from the atmosphere, somewhat mitigating the effects of climate change (Schuur et al. 2008). A detailed study of past C accumulation rates over a known historical warm period gives insight into how peatlands may respond to future climate warming. This project focuses on C accumulation in peatlands in Labrador, Canada, over the past 8,000 years. Because Canadian peatlands store approximately 150 Gt C, approximately 1/3 of the global peatland carbon pool, it is important to understand how the dynamics of these peatlands could be affected by present and future climate warming (Tarnocai 2006). However, the majority of research has focused on central Canada, leaving significant knowledge gaps surrounding coastal Eastern Canada (vanBellen et al. 2012). Particular emphasis in this study was given to the Holocene Thermal Maximum (HTM) which occurred from 4-6 thousand years ago in Labrador, when summer temperatures were 0.5 – 1°C warmer than at present (Kerwin et al. 2004). This study also attempts to determine the effect of fires on rates of C storage in these peatlands. Lightning-ignited peat fires have the potential to consume stored biomass and release significant CO2 to the atmosphere (Tarnocai 2006). Six peat cores (out of a total of 14 collected in Labrador in 2013) were used for this study. Throughout the following year, calibrated radiocarbon dates, bulk density, and percent carbon were used to calculate carbon accumulation rates. This summer, areal charcoal concentration (a measure of macroscopic charcoal used as a proxy for fire severity) was used to determine the influence of fires in this region. From 8,000 years ago to the present, rates of C accumulation averaged 23.1 ± 6.7 gC m-2 yr-1. Accumulation rates were highest during the HTM, averaging 29.6 ± 2.4 g C m-2 yr-1. Samples containing macroscopic charcoal had an average concentration of 0.62 mm2 cm-3 with a maximum concentration found of 3.51 mm2 cm-3. These consistently low charcoal concentrations indicate that fire was neither common nor severe in Labrador peatlands. While Kuhry (1994) and Payette et al. (2012) found that fires in Canada occurred twice as frequently during the HTM than at present, no trends in fire severity were found in these cores, and there was no evidence that fires had a significant influence on C accumulation. Therefore, the C accumulation trend we see in Labrador is not controlled by fire and is likely either a direct result of temperature variation or of vegetational and hydrological shifts caused by changes in climate. This work supports a growing body of evidence from high latitude peatlands suggesting that future warming conditions could lead to increased soil C sequestration. Final Report of research funded by the Freedman Coastal Studies Fellowship.
Time-Periodic Solutions of Driven-Damped Trimer Granular Crystals
Date: 2015-01-01
Creator: E. G. Charalampidis, F. Li, C. Chong, J. Yang, P. G., Kevrekidis
Access: Open access
- We consider time-periodic structures of granular crystals consisting of alternate chrome steel (S) and tungsten carbide (W) spherical particles where each unit cell follows the pattern of a 2: 1 trimer: S-W-S. The configuration at the left boundary is driven by a harmonic in-time actuation with given amplitude and frequency while the right one is a fixed wall. Similar to the case of a dimer chain, the combination of dissipation, driving of the boundary, and intrinsic nonlinearity leads to complex dynamics. For fixed driving frequencies in each of the spectral gaps, we find that the nonlinear surface modes and the states dictated by the linear drive collide in a saddle-node bifurcation as the driving amplitude is increased, beyond which the dynamics of the system becomes chaotic. While the bifurcation structure is similar for solutions within the first and second gap, those in the first gap appear to be less robust. We also conduct a continuation in driving frequency, where it is apparent that the nonlinearity of the system results in a complex bifurcation diagram, involving an intricate set of loops of branches, especially within the spectral gap. The theoretical findings are qualitatively corroborated by the experimental full-field visualization of the time-periodic structures.
Institutions and democratic invention in 19th-century America: Evidence from "great inventors," 1790-1930
Date: 2004-05-01
Creator: B. Zorina Khan, Kenneth L. Sokoloff
Access: Open access
"Not for ornament": Patenting activity by nineteenth-century women inventors
Date: 2000-01-01
Creator: B. Zorina Khan
Access: Open access
Prints of Edvard Munch: Mirror of His Life: An Exhibition of Prints from the Collection of Sarah G. and Lionel C. Epstein
Date: 1983-01-01
Creator: Sarah G. Epstein
Access: Open access
- Exhibition held at the Allen Memorial Art Museum, Mar. 1-27, 1983, and later at other museums, including Bowdoin College Museum of Art, Sept. 23-nov. 13, 1983.
Discrete breathers in a mass-in-mass chain with Hertzian local resonators
Date: 2017-02-22
Creator: S. P. Wallen, J. Lee, D. Mei, C. Chong, P. G., Kevrekidis, N. Boechler
Access: Open access
- We report on the existence of discrete breathers in a one-dimensional, mass-in-mass chain with linear intersite coupling and nonlinear, precompressed Hertzian local resonators, which is motivated by recent studies of the dynamics of microspheres adhered to elastic substrates. After predicting theoretically the existence of discrete breathers in the continuum and anticontinuum limits of intersite coupling, we use numerical continuation to compute a family of breathers interpolating between the two regimes in a finite chain, where the displacement profiles of the breathers are localized around one lattice site. We then analyze the frequency-amplitude dependence of the breathers by performing numerical continuation on a linear eigenmode (vanishing amplitude) solution of the system near the upper band gap edge. Finally, we use direct numerical integration of the equations of motion to demonstrate the formation and evolution of the identified localized modes in energy-conserving and dissipative scenarios, including within settings that may be relevant to future experimental studies.
The Relationship between Nitrate Concentration and Phytoplankton Blooms in Harpswell Sound
Date: 2014-08-01
Creator: Sasha Kramer
Access: Open access
- Phytoplankton require certain essential nutrients for growth. The Redfield ratio (Redfield, 1934) dictates an ideal element proportion of 106 carbon: 16 nitrogen: 1 phosphorus in order to maintain balanced phytoplankton growth through photosynthesis (Li et al., 2008). Under typical conditions, the concentration of nutrients present in the water directly controls the attainable phytoplankton yield (i.e. one inorganic nitrogen from nitrate yields one organic nitrogen in cellular form). While plankton that are starved of nutrients tend to die off quickly, plankton that are simply nutrient limited can adjust to constant but low levels of nutrient concentration (Cullen et al., 1992), often by adjusting their Redfield ratio. As an essential nutrient, nitrogen is a limiting factor for phytoplankton growth in the ocean (Dugdale, 1967). In oceanic and coastal ecosystems, dissolved nitrate (NO3-) is the most commonly available form of nitrogen (Zielinski et al., 2011). The formation of nutrients through microbial processes such as denitrification in deep water creates a source of nitrogen in the deep ocean (Arrigo, 2005). Phytoplankton growth is limited by both light and nutrients: therefore, the transport of nitrate into the euphotic zone controls the rate of primary production. In the Gulf of Maine, nitrate concentration varies with depth and season. Water density is determined by temperature and salinity; these qualities in turn control the depth of mixing and stratification, and thus the depth of the nitracline, the depth at which the high-nutrient deep waters are found (Townsend, 1998). An instrument known as the In Situ Ultraviolet Spectrophotometer (ISUS by Satlantic, Inc.) offers the ability to quantify nitrate concentrations based on optical properties. The instrument specifically measures the magnitude of absorption of ultraviolet light by dissolved nitrate molecules in the water. The concentration is determined from the ratio of the measured absorption coefficient to the molar absorption coefficient of nitrate. The ISUS is placed directly into the water at a site of specific interest—it measures the absorption and computes the nitrate concentration at this site every hour. This method of analysis gives superior stability, precision, and accuracy in data compared to a typical water sample analysis in a laboratory setting (Johnson & Coletti, 2002). For the past 4 years, an ISUS sensor has been deployed on the Bowdoin Buoy in Harpswell Sound collecting hourly observations of nitrate concentration concurrent with hourly observations of chlorophyll fluorescence (which can be used as a proxy for phytoplankton biomass). Once per week between May 21, 2014 and June 18, 2014, measurements of the depth distribution of salinity, temperature, density, chlorophyll fluorescence, and dissolved oxygen content were taken at the Bowdoin Buoy. Water samples were collected at five discrete depths each week, and were returned to the lab for analysis of chlorophyll concentration on the Turner fluorometer and nutrient concentration on the SmartChem. These laboratory analyses were used to calibrate and validate the buoy- and boat-based optical observations. The analysis of nitrate observations was performed in two phases. First, the variability in nitrate measured on the buoy since 2007 along with co-located discrete water samples was compared to a published historical dataset in order to place Harpswell Sound in the broader context of the Gulf of Maine. Second, the timeseries buoy observations of nitrate and chlorophyll were analyzed to determine temporal covariability. The historical nutrient and water quality data for the Gulf of Maine gathered by Rebuck et al. 2009 for 1990-2009 (in addition to unpublished data from 2010-2012) provided a broader spatial and temporal range for comparison with data from the Bowdoin Buoy in Harpswell Sound, Maine from 2007-2012. The historical nutrient data for the Gulf of Maine were measured in the lab; the nutrient data for Harpswell Sound was measured by the ISUS. There are relatively few match-ups for validation, but these points did show the correlation between the two methods. However, the similarity of the distribution of measured nitrate from water samples in lab and the in situ temperature and salinity characteristics of the sampled waters were very coherent with those measured by the ISUS, providing some quantitative validation. Future analysis of the ISUS data from summer 2014, in comparison to nutrient data from the water samples taken over the course of this summer, will further justify the validity of the ISUS data. A clear relationship between nitrate concentration and water temperature and nitrate concentration and salinity for both the Gulf of Maine and Harpswell Sound emerged (Figure 1). The highest concentrations of nitrate are found in the saltiest water (between 30-34 psu) and coldest water (between 3 and 12 degrees Celsius). This pattern was observed both generally in the Gulf of Maine and more specifically in Harpswell Sound, indicating that processes observed in Harpswell Sound are connected to broader scale oceanographic processes. These results also indicate that nutrients generated by deep ocean processes are dominant and river sources are negligible, a result that is not found in most areas. For both chlorophyll data and ISUS nitrate data, 2010 proved to be a model year with a clear and thorough timeseries from early February to late November. After analysis, the relationship between nitrate and chlorophyll showed a strong preliminary correlation of chlorophyll concentration (once again, as a proxy for phytoplankton biomass) increasing as nitrate concentration decreases (Figure 2). The low levels of phytoplankton consume the high levels of nitrate and therefore, as the bloom grows, the concentration of nitrate decreases proportionally. The expected dependence of chlorophyll concentration on nitrate concentration becomes incredibly clear through these results, similar to the results presented in Li et al., 2010. The ISUS data from 2007-2012 requires further processing in order to fully explore the relationship between chlorophyll and nitrate concentration on a pertinent timescale to bloom growth dynamics. While it is possible to construct a full time-series from the newly manipulated ISUS dataset after this summer work, it would be important and interesting to further examine the relationship between chlorophyll concentration and nitrate concentration in Harpswell Sound on daily, weekly, seasonal, and yearly timescales. This next step of investigation will require more time for data processing, but the work done this summer to validate the ISUS data and show the correlation between Harpswell Sound and the Gulf of Maine is incredibly promising for future work. Final report of research funded by the Doherty Coastal Studies Research Fellowship.
Fighting for Every Inch of Land: Greed and Grievance in Petition Mobilization in Zhejiang
Date: 2020-07-01
Creator: Christopher Heurlin
Access: Open access
- Despite a proliferation of studies of the micro-level dynamics of protests and petitions against land takings in China, we know very little about how meso-level factors, such as the local economy, influence petitions to Beijing and provincial governments. Drawing upon the economic approach to civil war, this article examines the roles played by grievances and greed in determining the scale of mobilization at the county level in Zhejiang province. Through archival evidence and interviews in Ningbo and Lishui, as well as an original dataset of petitions, this article suggests that both grievances and greed influence petitioning. Mobilization is especially high in Ningbo, where valuable real estate markets have prompted landless farmers to compete with local governments over control of the rents from land. The article proposes the concept of resource value activation as a cognitive mechanism that has contributed to this process of mobilization.
Inventing Prizes: A Historical Perspective on Innovation Awards and Technology Policy
Date: 2015-01-01
Creator: B. Zorina Khan
Access: Open access
- Prizes for innovations are currently experiencing a renaissance, following their marked decline during the nineteenth century. Debates about such incentive mechanisms tend to employ canonical historical anecdotes to motivate and support the analysis and policy proposals. Daguerre's "patent buyout," the Longitude Prize, inducement prizes for butter substitutes and billiard balls, the activities of the Royal Society of Arts and other "encouragement" institutions-all comprise potentially misleading case studies. The article surveys and summarizes extensive empirical research using samples drawn from Britain, France, and the United States, including "great inventors" and their ordinary counterparts, and prizes at industrial exhibitions. The results suggest that administered systems of rewards to innovators suffered from a number of disadvantages in design and practice, which might be inherent to their nonmarket orientation.
Conservation as if people also mattered: Policy and practice of community-based conservation
Date: 2013-01-01
Creator: Ashish Kothari, Philip Camill, Jessica Brown
Access: Open access
- Community-based conservation is being increasingly recognised as a major global force in the protection and sustainable management of ecosystems and species. Yet documentation of its main achievements and shortcomings, and the key issues it faces, is still at a nascent stage. This paper introduces the concept and experience of two forms of community-based conservation: Collaborative Management of Protected Areas (CMPA), and Indigenous Peoples' and Local Community Conserved Territories and Areas (ICCAs). It explores the emergence of these approaches in the context of global international conservation policy. Reviewing four case studies that were presented at a symposium convened at the Bowdoin College (Maine, USA, in November 2008), and drawing from the discussion during that session, it identifies some key lessons and principles that are likely to be applicable to community-based conservation across the world.
“How the World Could Be in Spite of the Way That It Is”: Broadway as a Reflection of Contemporary American Sociopolitical Life
Date: 2020-01-01
Creator: Isabel Thomas
Access: Open access
- Drawing on the plays and musicals of the 2018-2019 Broadway season, this thesis examines how theatre responds to the sociocultural, economic, and political conditions of society. Sociologists have largely overlooked theatre’s cultural influence, but Broadway productions act as social reflection by reproducing the conversations and inequalities of their context. Access to Broadway is limited, in various manners, by socioeconomic class, race, gender, ability, and age. As conversations about equity expand and audiences increasingly demand diversified representation, Broadway begins to shed the restraints of its conventions. In many regards, the recent changes fail in meaningfully transforming the Broadway institution. Those who control the stories on Broadway stages—producers, directors, writers—are disproportionately white and men, and the stories themselves predominantly uphold white privilege and heteronormativity. Economic pressures keep Broadway producers focused on high profit and cultural capital, at the expense of artistic and political risk. Broadway has particular affective power, employing the uniquely provocative effect of live theatre for unparalleled numbers of people. This influence is accompanied by responsibility to contribute to society’s progress rather than its stagnation, a responsibility which Broadway falls behind in fulfilling.
Advanced Mammals Access to this record is restricted to members of the Bowdoin community. Log in here to view.
Date: 2020-01-01
Creator: Emma Bezilla
Access: Access restricted to the Bowdoin Community
The role of the ROG1 protein in pectin perception Access to this record is restricted to members of the Bowdoin community. Log in here to view.
Date: 2014-05-01
Creator: Divya Hoon
Access: Access restricted to the Bowdoin Community
Bowdoin College Catalogue (1917-1918)
Date: 1918-01-01
Access: Open access
- Bowdoin College Bulletin no. 78
Wall-associated kinases are expressed throughout plant development and are required for cell expansion
Date: 2001-01-01
Creator: T. A. Wagner, B. D. Kohorn
Access: Open access
- The mechanism by which events in the angiosperm cell wall are communicated to the cytoplasm is not well characterized. A family of five Arabidopsis wall-associated kinases (WAKs) have the potential to provide a physical and signaling continuum between the cell wall and the cytoplasm. The WAKs have an active cytoplasmic protein kinase domain, span the plasma membrane, and contain an N terminus that binds the cell wall. We show here that WAKs are expressed at organ junctions, in shoot and root apical meristems, in expanding leaves, and in response to wall disturbances. Leaves expressing an antisense WAK gene have reduced WAK protein levels and exhibit a loss of cell expansion. WAKs are covalently bound to pectin in the cell wall, providing evidence that the binding of a structural carbohydrate by a receptor-like kinase may have significance in the control of cell expansion.
Bowdoin College - Medical School of Maine Catalogue (1906-1907)
Date: 1907-01-01
Access: Open access
- Bowdoin College Bulletin no. 8